Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4734

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4733: 13101 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 881363 to 882284 13101 mRNA_4734: 13102 - Hypothetical Protein, at 883185 to 884845 13102 mRNA_4735: 13103 - K03654 recQ ATP-dependent DNA helicase RecQ, at 885330 to 888560 13103

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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882,358 - 0.3
882,366 - 1.0
882,384 - -1.3
882,385 + -0.4
882,413 - -0.2
882,645 - -0.4
882,823 - 1.3
882,826 + 1.1
882,829 - -0.0
882,829 + 0.4
882,833 + -0.1
882,833 + 0.1
882,837 - 1.6
882,842 + 0.9
882,843 + 2.3
882,846 + 1.8
882,846 - -1.6
882,848 + 1.4
882,923 - -0.6
882,967 + 0.3
882,987 + -0.8
883,014 + -0.9
883,111 - 1.4
883,121 + 2.3
883,122 + -0.4
883,125 + 0.5
883,125 - -0.2
883,126 - 2.0
883,130 + -2.8
883,292 + 0.5
883,303 + 0.5
883,435 - 13102 mRNA_4734 0.15 0.9
883,568 + 13102 mRNA_4734 0.23 0.8
883,741 + 13102 mRNA_4734 0.33 0.6
883,768 + 13102 mRNA_4734 0.35 1.3
884,338 - 13102 mRNA_4734 0.69 1.3
884,713 - 1.0
884,958 + 3.0
885,041 - 1.3
885,160 - -0.2
885,162 - 0.9
885,165 + -0.5
885,179 - 1.3
885,445 + -0.8
885,462 - 1.4
885,469 - 1.1
885,489 + 0.6
885,597 - 1.4
885,601 - -0.4
885,606 + -0.6
885,613 + 1.3
885,620 + 0.5
885,627 + 3.1
885,650 + -0.8
885,790 - 13103 mRNA_4735 0.14 -1.7
885,812 + 13103 mRNA_4735 0.15 -0.1