Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4732

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4732: 13100 - HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338, at 879432 to 880805 13100 mRNA_4733: 13101 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 881363 to 882284 13101

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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878,467 - 0.8
878,497 - 0.8
878,528 - 0.5
878,533 + -0.0
878,549 - -1.0
878,549 - 0.2
878,557 + -0.8
878,585 - 1.5
878,586 + 4.3
878,592 - 0.7
878,600 + 0.0
878,674 + 0.1
878,675 - 2.2
878,705 - 0.9
878,710 - -1.2
878,713 - -0.1
878,715 + -0.9
878,721 - 0.4
878,722 + 0.5
878,729 - 0.4
878,731 + -0.8
878,736 - 0.9
878,737 + -1.3
878,739 - 0.4
878,758 + 0.1
878,758 + 0.4
878,763 + -0.7
878,768 - 0.4
878,775 - 1.2
878,776 + 1.0
878,779 - -0.3
878,779 - 0.3
878,784 + -0.2
878,790 + -0.3
878,791 - -1.8
878,798 - 1.7
878,799 + -0.4
878,808 + 1.3
878,815 - 0.7
878,818 + 0.5
878,818 + -0.0
878,842 + -0.3
878,847 - 0.2
878,899 - 1.2
878,913 - 0.3
878,941 - 2.6
878,953 + -2.4
878,973 + 0.7
879,034 - -2.1
879,076 - 0.3
879,084 + -0.1
879,087 - -0.4
879,088 + 1.3
879,088 + 0.1
879,089 - 0.1
879,090 + -2.3
879,093 + 2.6
879,106 - 1.5
879,112 + 1.2
879,112 + -1.3
879,112 + -0.4
879,116 + 0.4
879,133 + -0.3
879,136 - -0.2
879,145 - -0.6
879,147 - 0.5
879,154 + 0.4
879,157 - -1.1
879,159 - 1.5
879,159 - 2.5
879,161 - 0.4
879,162 - 3.0
879,165 + 1.2
879,172 - 0.4
879,172 - -0.4
879,173 - 3.7
879,174 - 0.4
879,178 + 1.8
879,188 - 0.1
879,188 - 0.3
879,189 + 2.4
879,190 - 1.7
879,193 + 1.4
879,195 - 0.2
879,197 - 0.3
879,197 + 0.1
879,198 - 0.7
879,205 - 2.3
879,212 + 0.2
879,216 + 0.1
879,218 - -0.9
879,225 + 1.0
879,230 + -0.0
879,238 + 0.7
879,239 - 0.4
879,260 + 0.7
879,273 - 1.0
879,282 + 0.2
879,296 - -0.7
879,296 - 1.1
879,305 + 0.6
879,308 - 1.5
879,309 - -0.2
879,323 - -2.4
879,331 - 1.3
879,331 - 1.4
879,360 - 0.2
879,370 + 0.4
879,370 - 0.4
879,401 + 0.5
879,417 - 2.1
879,419 + 0.3
879,423 - -0.1
879,423 + 0.2
879,427 - -0.3
879,430 + 0.3
879,433 + 0.6
879,439 - -1.4
879,439 - 0.3
879,441 - 0.3
879,444 - 0.1
879,444 + 2.2
879,458 - 2.5
879,474 + 0.5
879,480 - -2.2
879,484 + 2.4
879,597 - 13100 mRNA_4732 0.12 1.0
879,609 + 13100 mRNA_4732 0.13 2.2
879,613 - 13100 mRNA_4732 0.13 1.3
879,616 - 13100 mRNA_4732 0.13 -0.1
879,626 + 13100 mRNA_4732 0.14 -1.1
879,635 + 13100 mRNA_4732 0.15 0.5
879,649 + 13100 mRNA_4732 0.16 -1.0
879,768 - 13100 mRNA_4732 0.24 0.0
879,895 - 13100 mRNA_4732 0.34 1.5
879,916 - 13100 mRNA_4732 0.35 1.5
879,925 + 13100 mRNA_4732 0.36 0.7
879,929 - 13100 mRNA_4732 0.36 -1.5
880,301 - 13100 mRNA_4732 0.63 0.3
880,330 - 13100 mRNA_4732 0.65 2.6
880,336 - 13100 mRNA_4732 0.66 1.0
880,467 - 13100 mRNA_4732 0.75 -0.3
880,817 - 0.6
881,044 - -0.5
881,045 + -0.2
881,048 + 1.3
881,086 - 0.3
881,159 - -0.5
881,164 - 3.7
881,171 - -0.6
881,184 + 0.3
881,185 + -1.8
881,225 + -0.8
881,243 + 0.4
881,257 - -0.2
881,293 - -2.0
881,428 + 0.7
881,506 - 13101 mRNA_4733 0.16 0.7
881,525 - 13101 mRNA_4733 0.18 1.3
881,791 - 13101 mRNA_4733 0.46 -0.0