Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4723

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858449 to 860854 13090 mRNA_4723: 13091 - Hypothetical Protein, at 861099 to 862312 13091 mRNA_4724: 13092 - Hypothetical Protein, at 862533 to 863753 13092

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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860,167 - 13090 mRNA_4722 0.71 -1.6
860,307 - 13090 mRNA_4722 0.77 -1.0
860,307 - 13090 mRNA_4722 0.77 0.6
860,617 - -1.0
860,722 - 0.0
860,739 - -1.1
860,753 + 0.9
860,756 - 0.8
860,764 + 2.4
860,784 - -1.0
860,903 + -0.2
860,913 + 0.8
860,917 - -0.2
860,917 + 0.6
860,922 - 0.1
860,925 + 0.4
860,947 + -0.2
861,499 + 13091 mRNA_4723 0.33 1.1
862,525 - 0.5
862,548 + -0.6
862,650 - 1.5
862,687 + 13092 mRNA_4724 0.13 1.7
862,991 + 13092 mRNA_4724 0.38 0.4