Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4707

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4706: 13074 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 816383 to 818450 13074 mRNA_4707: 13075 - KOG4431 Uncharacterized protein, induced by hypoxia , at 818806 to 819404 13075 mRNA_4708: 13076 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 819652 to 821476 13076

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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818,473 - -0.6
818,486 + -0.3
818,487 - 0.4
818,487 + 0.1
818,495 + 0.5
818,498 + 0.8
818,530 - 1.3
818,639 + 1.0
818,779 - -0.1
818,783 + -0.4
818,784 + 0.5
818,903 - 13075 mRNA_4707 0.16 2.2
819,086 + 13075 mRNA_4707 0.47 1.2
819,219 - 13075 mRNA_4707 0.69 1.5
819,501 - 0.1
819,512 - 0.2
819,516 + -2.5
819,521 - 2.8
819,523 + 0.6
819,534 + 0.8
819,648 - 2.1
819,648 - 0.0
819,781 + 1.0
819,870 + 13076 mRNA_4708 0.12 -0.6
819,949 + 13076 mRNA_4708 0.16 0.6
819,972 - 13076 mRNA_4708 0.18 1.4
820,105 - 13076 mRNA_4708 0.25 0.2
820,237 - 13076 mRNA_4708 0.32 -0.4