Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4674

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4673: 13041 - K01069 E3.1.2.6, gloB hydroxyacylglutathione hydrolase, at 743886 to 745346 13041 mRNA_4674: 13042 - K08150 SLC2A13, ITR MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13, at 745872 to 747839 13042 mRNA_4675: 13043 - SUPERFAMILY--SSF53448, at 748031 to 749259 13043

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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744,954 + 13041 mRNA_4673 0.73 0.1
744,966 + 13041 mRNA_4673 0.74 -0.8
745,219 - 0.3
745,228 + 0.9
745,295 + 0.7
745,330 - -0.8
745,362 - 1.0
745,409 - -0.9
745,414 - 1.0
745,415 - -0.8
745,419 - 0.7
745,420 - 0.4
745,421 + 0.5
745,421 + -1.3
745,424 + 0.7
745,428 - -0.0
745,432 + 1.0
745,434 - -2.2
745,437 + 1.1
745,450 - 1.0
745,455 + -0.0
745,456 - 0.8
745,496 - 1.7
745,502 + -0.4
745,552 + -0.4
745,562 + -0.5
745,569 + 0.2
745,574 - -0.3
745,581 - 0.5
745,585 + -1.4
745,591 + 0.1
745,654 - 1.5
745,714 - -0.2
745,717 - -1.4
745,733 + 0.3
745,734 + -0.9
745,756 + 0.8
745,774 + 1.3
745,904 - -0.3
745,905 - 3.9
746,216 + 13042 mRNA_4674 0.17 2.8
746,652 + 13042 mRNA_4674 0.40 -1.2
746,801 - 13042 mRNA_4674 0.47 -0.4
747,233 - 13042 mRNA_4674 0.69 2.0
747,384 + 13042 mRNA_4674 0.77 0.2
747,499 + 13042 mRNA_4674 0.83 -1.0
747,684 + 0.4
747,815 + 0.1
747,839 + 0.7