Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4671

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4670: 13038 - Hypothetical Protein, at 738816 to 739415 13038 mRNA_4671: 13039 - Hypothetical Protein, at 739616 to 741558 13039 mRNA_4672: 13040 - K11979 UBR7 E3 ubiquitin-protein ligase UBR7, at 742031 to 743506 13040

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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738,994 + 13038 mRNA_4670 0.30 -0.3
739,168 + 13038 mRNA_4670 0.59 2.1
739,343 - 13038 mRNA_4670 0.88 1.7
739,460 - -0.2
739,481 - -1.4
739,609 + -1.7
739,730 - 2.0
739,743 + -0.2
739,758 + 0.3
740,179 - 13039 mRNA_4671 0.29 -0.7
740,487 - 13039 mRNA_4671 0.45 1.4
740,963 + 13039 mRNA_4671 0.69 0.3
741,796 - 1.6
741,822 - 2.3
741,931 + -0.1
741,943 - -0.3
741,962 + 0.0
741,963 - 0.3
742,115 - 0.7
742,123 + 0.2
742,135 + 1.2
742,405 - 13040 mRNA_4672 0.25 0.9
742,544 - 13040 mRNA_4672 0.35 -1.7