Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4658

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4657: 13025 - Hypothetical Protein, at 704703 to 705380 13025 mRNA_4658: 13026 - Hypothetical Protein, at 705825 to 708792 13026 mRNA_4659: 13027 - KOG1134 Uncharacterized conserved protein, at 709545 to 713167 13027

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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704,848 + 13025 mRNA_4657 0.21 0.5
705,128 - 13025 mRNA_4657 0.63 0.7
705,134 + 13025 mRNA_4657 0.64 0.7
705,148 - 13025 mRNA_4657 0.66 0.1
705,160 + 13025 mRNA_4657 0.67 -0.3
705,565 - -0.7
705,580 - -0.8
705,580 + -0.5
705,584 + 1.4
705,585 + 0.6
705,585 + 0.2
705,586 - 1.9
705,618 + 0.2
705,626 + 0.3
705,705 + 1.3
705,709 - 0.5
705,724 - -0.8
705,746 + 0.4
705,752 - -0.3
705,804 - 1.5
705,842 - 0.2
705,865 + 2.7
705,865 + -0.6
705,873 + 3.3
706,034 - 0.6
706,139 + 13026 mRNA_4658 0.11 1.1
706,158 - 13026 mRNA_4658 0.11 0.1
706,177 + 13026 mRNA_4658 0.12 -0.4
706,328 + 13026 mRNA_4658 0.17 -1.2
706,577 - 13026 mRNA_4658 0.25 1.0
706,588 - 13026 mRNA_4658 0.26 -0.2
706,604 + 13026 mRNA_4658 0.26 -0.9
706,611 + 13026 mRNA_4658 0.26 -0.0
706,622 + 13026 mRNA_4658 0.27 -0.6
706,625 + 13026 mRNA_4658 0.27 -0.2
706,627 + 13026 mRNA_4658 0.27 1.7
706,743 + 13026 mRNA_4658 0.31 1.8
706,753 + 13026 mRNA_4658 0.31 0.1
706,755 + 13026 mRNA_4658 0.31 0.4
706,756 - 13026 mRNA_4658 0.31 -0.3
706,759 - 13026 mRNA_4658 0.31 0.8
706,777 - 13026 mRNA_4658 0.32 1.9
706,777 - 13026 mRNA_4658 0.32 -1.4
706,911 + 13026 mRNA_4658 0.37 0.5
706,912 - 13026 mRNA_4658 0.37 -0.2
706,913 - 13026 mRNA_4658 0.37 0.7
706,941 + 13026 mRNA_4658 0.38 0.2
707,055 + 13026 mRNA_4658 0.41 0.4
707,064 + 13026 mRNA_4658 0.42 0.4
707,064 + 13026 mRNA_4658 0.42 0.0
707,066 + 13026 mRNA_4658 0.42 0.9
707,388 - 13026 mRNA_4658 0.53 1.0
707,518 + 13026 mRNA_4658 0.57 -0.2
707,627 - 13026 mRNA_4658 0.61 -0.5
707,659 + 13026 mRNA_4658 0.62 0.5
707,788 + 13026 mRNA_4658 0.66 0.4
707,950 + 13026 mRNA_4658 0.72 0.1
708,063 - 13026 mRNA_4658 0.75 0.3
708,068 - 13026 mRNA_4658 0.76 0.9
708,238 - 13026 mRNA_4658 0.81 -0.2
708,269 + 13026 mRNA_4658 0.82 0.5
708,360 + 13026 mRNA_4658 0.85 2.3
708,378 - 13026 mRNA_4658 0.86 1.9
708,512 - -0.3
708,527 + 0.6
708,664 + -2.5
708,686 + 0.3
708,763 - 0.9
708,859 - 0.5
708,962 + 0.0
708,971 - 1.7
708,971 - 0.3
708,977 + 1.5
708,982 + 0.5
708,984 - 1.3
708,993 - 0.7
708,995 + -0.9
708,995 - 2.0
708,995 - -0.7
708,996 - -1.1
708,998 + 2.4
709,007 + 0.8
709,011 + -0.1
709,022 + -0.1
709,028 + 1.1
709,047 + 0.7
709,055 + 0.5
709,061 - 1.1
709,062 + 2.8
709,077 - 1.7
709,077 - -0.4
709,079 + -0.5
709,082 - 1.3
709,104 - -0.1
709,115 + -0.5
709,117 + 3.0
709,119 - -0.3
709,120 + 0.3
709,125 - -0.1
709,128 + 3.0
709,137 - 1.2
709,146 + 1.7
709,187 - 0.3
709,192 + 0.5
709,207 + -0.3
709,207 - -0.3
709,214 + 0.3
709,219 - 0.8
709,219 + -1.3
709,224 + 0.7
709,226 + 0.0
709,230 + 1.4
709,231 - 0.9
709,254 - 2.2
709,256 - 0.8
709,258 + 0.6
709,259 + 0.2
709,261 - 0.7
709,261 - -0.1
709,267 + -0.6
709,267 - 2.3
709,268 + 3.8
709,268 + -0.8
709,269 + 0.4
709,275 + 0.0
709,278 - 2.3
709,279 - 0.8
709,288 - 0.2
709,289 + -0.0
709,289 + -1.1
709,294 + 0.1
709,295 - -1.1
709,305 + 0.1
709,306 - 0.3
709,307 - 0.3
709,310 - -2.4
709,311 - -1.2
709,312 + -0.8
709,336 + 0.4
709,419 - -1.2
709,452 - 0.6