Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4602

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4601: 12969 - HMMPfam-Sen15 protein-PF09631,SUPERFAMILY--SSF53032, at 560875 to 561580 12969 mRNA_4602: 12970 - HMMPfam-NYN domain-PF01936, at 561866 to 562949 12970 mRNA_4603: 12971 - K07119 K07119 uncharacterized protein, at 563356 to 565108 12971

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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561,582 - -0.7
561,633 - -0.1
561,698 - -0.5
561,705 + 0.8
561,711 + -0.2
561,734 - 3.5
561,843 - 1.4
562,149 - 12970 mRNA_4602 0.26 1.6
562,158 + 12970 mRNA_4602 0.27 0.8
562,571 - 12970 mRNA_4602 0.65 0.0
562,709 + 12970 mRNA_4602 0.78 2.5
562,733 + 12970 mRNA_4602 0.80 1.5
562,831 + 12970 mRNA_4602 0.89 1.2
562,857 + 1.9
562,865 + 1.1
562,870 + 2.2
562,871 + 0.7
563,143 - 0.3
563,151 + -0.4
563,160 + 2.1
563,180 + -0.1
563,326 - 0.6
563,464 - 1.1