Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4587

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4587: 12955 - HMMPfam-Complex1_LYR-like-PF13232, at 531133 to 531604 12955 mRNA_4588: 12956 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 532507 to 535207 12956

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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530,342 + 0.0
530,346 - -0.3
530,484 + 0.5
530,533 + 0.1
530,637 - -0.1
530,638 - 0.2
530,655 - -0.5
530,792 - -1.6
530,819 + 0.4
531,221 + 12955 mRNA_4587 0.19 0.5
531,324 + 12955 mRNA_4587 0.40 -0.2
531,375 - 12955 mRNA_4587 0.51 -0.1
531,509 - 12955 mRNA_4587 0.80 0.6
531,529 - 12955 mRNA_4587 0.84 1.2
531,678 + 0.6
531,821 + 0.1
532,566 - 0.3