Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4556

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4555: 12923 - KOG3855 Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis, at 452202 to 455003 12923 mRNA_4556: 12924 - KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes, at 455167 to 456572 12924 mRNA_4557: 12925 - KOG3318 Predicted membrane protein, at 456635 to 457680 12925

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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454,725 - -1.5
455,273 - -0.6
455,294 + -0.8
455,786 + 12924 mRNA_4556 0.44 -1.9
455,964 - 12924 mRNA_4556 0.57 0.6
456,452 + 0.3
456,748 - 12925 mRNA_4557 0.11 -0.4
456,763 + 12925 mRNA_4557 0.12 0.2
456,799 - 12925 mRNA_4557 0.16 0.5
456,915 + 12925 mRNA_4557 0.27 -0.5
456,918 + 12925 mRNA_4557 0.27 0.9
457,349 + 12925 mRNA_4557 0.68 1.1
457,364 - 12925 mRNA_4557 0.70 -0.5