Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4534

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4533: 12901 - Hypothetical Protein, at 398174 to 399920 12901 mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400318 to 402345 12902 mRNA_4535: 12903 - Hypothetical Protein, at 402768 to 403548 12903

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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399,440 + 12901 mRNA_4533 0.72 1.2
399,690 + 12901 mRNA_4533 0.87 1.3
399,849 + 1.0
399,852 + 1.1
399,996 + 3.2
400,010 - -0.4
400,033 - -0.4
400,173 + 2.7
400,783 + 12902 mRNA_4534 0.23 -1.1
401,170 - 12902 mRNA_4534 0.42 0.4
401,343 - 12902 mRNA_4534 0.51 0.1
401,611 + 12902 mRNA_4534 0.64 0.1
401,734 - 12902 mRNA_4534 0.70 0.5
402,083 - 12902 mRNA_4534 0.87 -1.1
402,088 + 12902 mRNA_4534 0.87 -0.6
402,185 - 0.1
402,216 + -0.6
402,337 - 3.3
402,379 - 1.6
402,484 + -1.2
402,487 - -0.0
402,490 + -0.2
402,497 - 0.3
402,506 - 1.5
402,509 - 1.6
402,511 - 0.8
402,517 + 0.3
402,517 + 0.6
402,518 - -0.3
402,519 + 0.9
402,524 - 0.6
402,527 - 1.1
402,529 + -0.7
402,529 + 1.4
402,530 + 0.1
402,530 + 1.5
402,573 - -0.9
402,578 + 0.0
402,602 - -0.8
402,602 + 2.1
402,604 - 0.3
402,609 + 1.3
402,612 + 0.6
402,613 + 0.4
402,629 + 1.0
402,654 + -0.5
402,663 - -0.6
402,665 - -0.5
402,678 - -0.8
402,679 - -1.3
402,679 - -0.5
402,690 + 0.8
402,693 + -0.2
402,706 - -0.7
402,738 - 0.9
402,753 - -0.1
402,877 - 12903 mRNA_4535 0.14 2.3
403,015 - 12903 mRNA_4535 0.32 1.0
403,334 + 12903 mRNA_4535 0.72 0.8