Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4527

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4526: 12894 - K12446 E2.7.1.46 L-arabinokinase, at 382744 to 384550 12894 mRNA_4527: 12895 - SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 384813 to 386229 12895 mRNA_4528: 12896 - Hypothetical Protein, at 386739 to 388320 12896

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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383,820 - 12894 mRNA_4526 0.60 0.8
383,858 - 12894 mRNA_4526 0.62 0.6
383,877 + 12894 mRNA_4526 0.63 1.0
384,590 - -0.1
384,608 - 0.4
384,904 - -0.2
385,233 + 12895 mRNA_4527 0.30 -0.8
385,366 + 12895 mRNA_4527 0.39 0.7
385,369 - 12895 mRNA_4527 0.39 1.4
385,379 + 12895 mRNA_4527 0.40 1.7
385,676 - 12895 mRNA_4527 0.61 0.9
385,721 + 12895 mRNA_4527 0.64 -0.0
385,781 + 12895 mRNA_4527 0.68 1.1
385,865 - 12895 mRNA_4527 0.74 -1.1
386,685 - -2.2
387,006 + 12896 mRNA_4528 0.17 1.7
387,226 - 12896 mRNA_4528 0.31 1.3