Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4525

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4524: 12892 - Hypothetical Protein, at 379640 to 380547 12892 mRNA_4525: 12893 - KOG0143 Iron/ascorbate family oxidoreductases, at 381008 to 382487 12893 mRNA_4526: 12894 - K12446 E2.7.1.46 L-arabinokinase, at 382744 to 384550 12894

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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380,089 + 12892 mRNA_4524 0.49 -0.7
380,187 + 12892 mRNA_4524 0.60 1.6
380,633 - 1.3
380,733 + 0.6
381,808 - 12893 mRNA_4525 0.54 -0.1
381,812 + 12893 mRNA_4525 0.54 -0.4
382,086 + 12893 mRNA_4525 0.73 0.8
382,112 + 12893 mRNA_4525 0.75 -0.7
382,142 - 12893 mRNA_4525 0.77 -1.0
382,244 - 12893 mRNA_4525 0.84 -3.2
382,259 + 12893 mRNA_4525 0.85 2.1
382,285 - 12893 mRNA_4525 0.86 -0.4
382,291 - 12893 mRNA_4525 0.87 0.3
382,291 - 12893 mRNA_4525 0.87 0.1
382,298 + 12893 mRNA_4525 0.87 0.0
382,400 + -2.7
382,405 + 2.5
382,518 - 2.2
382,676 - 0.7
382,684 + 0.4
382,807 - 0.0
382,828 - 0.7
382,934 + 12894 mRNA_4526 0.11 -0.5
382,979 + 12894 mRNA_4526 0.13 -0.2
383,104 + 12894 mRNA_4526 0.20 1.9
383,233 - 12894 mRNA_4526 0.27 -0.2