Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4515

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4514: 12882 - K03241 EIF2B3 translation initiation factor eIF-2B subunit gamma, at 358087 to 360216 12882 mRNA_4515: 12883 - SUPERFAMILY--SSF51735, at 360649 to 361233 12883 mRNA_4516: 12884 - BLAST ketoreductase [Coccidioides immitis RS], at 361313 to 361864 12884

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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360,273 + -0.6
360,433 + 0.8
360,545 - -0.2
360,577 - 0.8
360,604 + -0.4
360,704 + -0.0
360,749 + 12883 mRNA_4515 0.17 0.7
361,128 + 12883 mRNA_4515 0.82 1.2
361,132 - 12883 mRNA_4515 0.83 0.6
361,590 + 12884 mRNA_4516 0.50 -1.6
361,738 + 12884 mRNA_4516 0.77 1.5
361,743 - 12884 mRNA_4516 0.78 0.1
361,746 + 12884 mRNA_4516 0.78 -1.7
361,747 + 12884 mRNA_4516 0.79 1.1
361,754 - 12884 mRNA_4516 0.80 -0.3
361,754 - 12884 mRNA_4516 0.80 -0.2
361,764 + 12884 mRNA_4516 0.82 0.1
361,886 - 1.3
361,905 - 1.0
361,910 - 0.0
361,919 + -0.2
361,924 + 0.3
362,050 - -0.4
362,069 + -0.5
362,195 - 0.2
362,224 - 1.8
362,226 + 0.6
362,229 - 1.1
362,231 + 2.4