Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4510

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4509: 12877 - HMMPfam-Ctr copper transporter family-PF04145, at 345259 to 347501 12877 mRNA_4510: 12878 - KOG0627 Heat shock transcription factor, at 348191 to 349956 12878

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
347,377 - 0.2
347,686 - 2.5
347,813 - -0.2
347,976 - 0.3
348,130 - 1.6
348,312 - 0.8
348,418 + 12878 mRNA_4510 0.13 2.5
348,789 + 12878 mRNA_4510 0.34 1.0
348,978 - 12878 mRNA_4510 0.45 0.4
349,135 + 12878 mRNA_4510 0.53 0.5
349,271 - 12878 mRNA_4510 0.61 -1.2
349,413 + 12878 mRNA_4510 0.69 -0.6
349,691 - 12878 mRNA_4510 0.85 2.2
349,864 + 0.4
349,957 + 0.6
349,980 - 0.6
349,990 + -0.6
349,995 - -0.2
350,011 + 0.5
350,031 - 1.1
350,077 - -0.4
350,133 + 0.8
350,143 - 0.8
350,159 + -2.5
350,177 + 0.9
350,178 - -0.2
350,183 + 1.5
350,191 + 1.9
350,211 + 2.0
350,329 - 0.1
350,449 + -0.4
350,457 + 1.5
350,479 - -1.4
350,484 + -0.9
350,586 - 1.6
350,603 + 1.5
350,650 - 0.3
350,797 + -0.3
350,800 - -0.6
350,803 + 0.3
350,817 + -1.9
350,817 + 4.6
350,921 - 0.0
350,941 - 0.5
350,947 + 0.6
350,948 - -0.2