Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4497

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4497: 12865 - SUPERFAMILY--SSF81383, at 320556 to 322046 12865 mRNA_4498: 12866 - Hypothetical Protein, at 322589 to 323741 12866

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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319,751 + -0.6
319,773 + 0.1
319,775 - 1.3
320,103 + -0.8
320,123 - -2.7
320,124 + 1.2
320,124 + 1.7
320,127 - 0.0
320,297 - -1.5
320,384 - 3.3
320,390 + 1.4
320,410 - -2.0
320,549 - -1.1
320,661 + 1.5
320,874 + 12865 mRNA_4497 0.21 0.9
320,974 - 12865 mRNA_4497 0.28 -1.1
320,978 + 12865 mRNA_4497 0.28 0.6
321,120 - 12865 mRNA_4497 0.38 0.9
321,180 - 12865 mRNA_4497 0.42 -0.2
321,182 - 12865 mRNA_4497 0.42 -0.4
321,250 + 12865 mRNA_4497 0.47 -1.0
321,326 - 12865 mRNA_4497 0.52 -2.0
321,447 - 12865 mRNA_4497 0.60 0.7
321,590 - 12865 mRNA_4497 0.69 2.0
321,880 + 12865 mRNA_4497 0.89 2.2
321,914 - 1.2
322,028 - 0.4
322,035 - 1.3
322,050 + 0.1
322,103 - 0.9
322,123 + -0.4
322,423 - -0.7
322,674 + 1.8