Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4492

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4491: 12859 - Hypothetical Protein, at 306091 to 307232 12859 mRNA_4492: 12860 - KOG1198 Zinc-binding oxidoreductase, at 307905 to 309384 12860 mRNA_4493: 12861 - SUPERFAMILY--SSF52047, at 309576 to 311024 12861

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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307,546 - 0.9
307,687 - 1.7
307,907 + 1.8
307,918 + 1.6
307,919 + 1.5
308,052 + -1.0
308,199 - 12860 mRNA_4492 0.20 -1.1
308,205 + 12860 mRNA_4492 0.20 -0.7
308,597 + 12860 mRNA_4492 0.47 -1.6
308,736 + 12860 mRNA_4492 0.56 -2.4
308,803 - 12860 mRNA_4492 0.61 1.1
308,898 - 12860 mRNA_4492 0.67 -0.0
308,940 + 12860 mRNA_4492 0.70 -1.5
309,032 + 12860 mRNA_4492 0.76 0.8
309,087 + 12860 mRNA_4492 0.80 0.5
309,227 + 12860 mRNA_4492 0.89 0.1
309,337 + -0.4
309,499 - 0.8
309,513 - -0.1
309,636 - -0.5
309,693 + -0.5
309,766 + 12861 mRNA_4493 0.13 1.6
310,345 - 12861 mRNA_4493 0.53 0.1