Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4491

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4490: 12858 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 304461 to 305865 12858 mRNA_4491: 12859 - Hypothetical Protein, at 306091 to 307232 12859 mRNA_4492: 12860 - KOG1198 Zinc-binding oxidoreductase, at 307905 to 309384 12860

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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305,112 + 12858 mRNA_4490 0.46 -0.2
305,263 - 12858 mRNA_4490 0.57 0.1
305,325 - 12858 mRNA_4490 0.61 0.4
305,721 + 12858 mRNA_4490 0.90 0.3
305,904 - 1.7
306,298 + 12859 mRNA_4491 0.18 1.0
306,548 - 12859 mRNA_4491 0.40 -0.0
306,586 + 12859 mRNA_4491 0.43 0.4
306,765 + 12859 mRNA_4491 0.59 -0.3
306,812 + 12859 mRNA_4491 0.63 3.5
307,546 - 0.9
307,687 - 1.7
307,907 + 1.8
307,918 + 1.6
307,919 + 1.5
308,052 + -1.0
308,199 - 12860 mRNA_4492 0.20 -1.1
308,205 + 12860 mRNA_4492 0.20 -0.7