Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4454

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4453: 12821 - KOG3855 Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis, at 218886 to 222303 12821 mRNA_4454: 12822 - K03380 E1.14.13.7 phenol 2-monooxygenase, at 223173 to 226550 12822 mRNA_4455: 12823 - K08489 STX16 syntaxin 16, at 226736 to 228552 12823

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
222,187 + 0.3
222,334 + 1.2
222,337 + 0.5
222,337 + 0.9
222,418 + 1.3
222,468 + 0.5
222,487 + 0.2
222,577 - -1.0
222,708 - -0.2
222,726 - 0.8
222,787 - 1.4
223,042 + 0.9
223,051 - -1.5
223,072 + -0.6
223,128 - 0.1
223,168 - 1.9
223,177 + 0.4
223,226 + 1.4
223,312 - 2.0
223,437 + 1.3
223,480 - 0.3
223,494 + 0.7
223,500 + 0.4
223,560 - 12822 mRNA_4454 0.11 0.4
223,601 - 12822 mRNA_4454 0.13 0.3
223,872 - 12822 mRNA_4454 0.21 3.9
223,879 - 12822 mRNA_4454 0.21 1.5
223,893 - 12822 mRNA_4454 0.21 -0.6
223,929 - 12822 mRNA_4454 0.22 -0.0
223,950 - 12822 mRNA_4454 0.23 0.3
224,163 - 12822 mRNA_4454 0.29 0.9
224,214 + 12822 mRNA_4454 0.31 -0.3
224,289 - 12822 mRNA_4454 0.33 1.2
224,290 + 12822 mRNA_4454 0.33 0.6
224,295 - 12822 mRNA_4454 0.33 0.1
224,391 + 12822 mRNA_4454 0.36 1.5
224,525 + 12822 mRNA_4454 0.40 2.4
224,582 - 12822 mRNA_4454 0.42 0.4
224,690 + 12822 mRNA_4454 0.45 0.7
224,818 + 12822 mRNA_4454 0.49 1.5
224,854 + 12822 mRNA_4454 0.50 1.4
224,900 + 12822 mRNA_4454 0.51 2.1
224,903 - 12822 mRNA_4454 0.51 0.6
225,050 + 12822 mRNA_4454 0.56 1.9
225,194 - 12822 mRNA_4454 0.60 1.3
225,226 - 12822 mRNA_4454 0.61 -0.4
225,309 - 12822 mRNA_4454 0.63 0.6
225,312 - 12822 mRNA_4454 0.63 -0.8
225,617 - 12822 mRNA_4454 0.72 -0.6
225,905 - 12822 mRNA_4454 0.81 0.2
225,905 - 12822 mRNA_4454 0.81 0.8
226,052 - 12822 mRNA_4454 0.85 0.3
226,363 - 0.1
226,378 - 0.2
226,388 + 0.0
226,388 + 3.0
226,458 + -0.7
226,510 + 1.6
226,539 - 0.1
226,699 - 0.5
226,823 + 0.5
226,837 - -0.1
226,856 - 1.7
226,868 - 0.3
226,972 - 12823 mRNA_4455 0.13 2.8
227,382 + 12823 mRNA_4455 0.36 0.1