Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4398

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4397: 12765 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129, at 90015 to 90968 12765 mRNA_4398: 12766 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 91356 to 92891 12766 mRNA_4399: 12767 - HMMPfam-CFEM domain-PF05730, at 93703 to 94660 12767

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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91,566 + 12766 mRNA_4398 0.14 1.7
91,621 - 12766 mRNA_4398 0.17 -0.2
91,865 - 12766 mRNA_4398 0.33 1.4
91,922 + 12766 mRNA_4398 0.37 2.1
91,960 + 12766 mRNA_4398 0.39 -2.0
92,027 + 12766 mRNA_4398 0.44 -0.3
92,491 + 12766 mRNA_4398 0.74 0.1
92,514 + 12766 mRNA_4398 0.75 -0.2
92,706 + 12766 mRNA_4398 0.88 -0.3
92,783 + -0.6
92,785 - -0.2
92,809 + -1.3
92,916 + -0.3
92,925 + 0.3
92,927 - 3.6
92,932 - 0.2
92,950 - -0.2
92,962 - -0.3
92,964 + -0.4
92,967 - 0.3
92,972 - 0.2
92,989 - 1.4
93,028 + -0.3
93,095 + -0.0
93,121 - -1.0
93,151 - 1.2
93,265 - 1.1
93,268 - 0.5
93,269 - 1.6
93,283 - -0.6
93,284 + -0.9
93,416 - -0.3
93,565 + 1.6