Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4377

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4377: 12745 - Hypothetical Protein, at 52516 to 53498 12745 mRNA_4378: 12746 - KOG2432 Uncharacterized conserved protein, at 53641 to 56318 12746

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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51,564 + 0.1
51,568 - -0.1
51,580 + 1.1
51,702 + 0.3
51,713 - 2.0
51,718 + -0.4
52,007 + -0.0
52,300 + 1.2
52,450 + 2.4
52,553 - -1.1
52,560 - 0.2
52,568 - -0.4
52,577 + -0.7
52,616 + 12745 mRNA_4377 0.10 -0.1
52,849 + 12745 mRNA_4377 0.34 0.3
52,852 - 12745 mRNA_4377 0.34 0.3
52,854 + 12745 mRNA_4377 0.34 1.5
52,956 + 12745 mRNA_4377 0.45 0.1
53,093 - 12745 mRNA_4377 0.59 1.5
53,387 + 12745 mRNA_4377 0.89 0.1
53,449 + -1.0
53,487 + 1.5
53,556 + 0.5
53,584 - 0.2
53,585 + -2.1
53,708 - 0.1
53,716 + 1.6
53,730 - 0.4
53,733 + 0.8
53,866 + 0.6
53,924 + 12746 mRNA_4378 0.11 -1.8
54,053 - 12746 mRNA_4378 0.15 1.2
54,161 + 12746 mRNA_4378 0.19 -2.1
54,174 - 12746 mRNA_4378 0.20 0.9
54,343 + 12746 mRNA_4378 0.26 0.1
54,468 - 12746 mRNA_4378 0.31 2.0