Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4374

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4373: 12741 - SUPERFAMILY--SSF52058, at 41270 to 42990 12741 mRNA_4374: 12742 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 43132 to 46033 12742 mRNA_4375: 12743 - K14209 SLC36A, PAT solute carrier family 36 (proton-coupled amino acid transporter), at 46350 to 49394 12743

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
42,232 + 12741 mRNA_4373 0.56 -0.5
42,540 + 12741 mRNA_4373 0.74 -2.5
42,735 + 12741 mRNA_4373 0.85 -2.4
42,790 + 12741 mRNA_4373 0.88 1.7
42,864 + 0.1
42,973 + 2.3
43,033 + 0.8
43,033 + 2.0
43,160 + -1.0
43,162 - 0.0
43,311 + -0.8
43,322 - 0.6
43,373 - -0.1
43,382 + -0.2
43,425 + 12742 mRNA_4374 0.10 -0.9
43,437 + 12742 mRNA_4374 0.11 -0.3
43,541 - 12742 mRNA_4374 0.14 -0.5
43,542 - 12742 mRNA_4374 0.14 0.6
43,720 + 12742 mRNA_4374 0.20 3.9
43,871 + 12742 mRNA_4374 0.25 1.3
43,896 - 12742 mRNA_4374 0.26 0.2
43,905 - 12742 mRNA_4374 0.27 1.1
43,943 - 12742 mRNA_4374 0.28 0.8
44,151 + 12742 mRNA_4374 0.35 0.9
44,207 - 12742 mRNA_4374 0.37 1.4
44,277 + 12742 mRNA_4374 0.39 0.3
44,319 - 12742 mRNA_4374 0.41 0.3
44,401 - 12742 mRNA_4374 0.44 1.7
44,402 + 12742 mRNA_4374 0.44 -2.7
44,727 - 12742 mRNA_4374 0.55 0.8
44,761 - 12742 mRNA_4374 0.56 0.1
44,763 - 12742 mRNA_4374 0.56 1.7
44,781 - 12742 mRNA_4374 0.57 -0.3
44,838 - 12742 mRNA_4374 0.59 2.1
44,847 - 12742 mRNA_4374 0.59 0.4
44,873 - 12742 mRNA_4374 0.60 1.2
44,883 - 12742 mRNA_4374 0.60 0.4
44,895 + 12742 mRNA_4374 0.61 0.4
44,910 + 12742 mRNA_4374 0.61 2.3
45,168 - 12742 mRNA_4374 0.70 1.5
45,173 - 12742 mRNA_4374 0.70 -2.3
45,189 + 12742 mRNA_4374 0.71 -1.0
45,445 + 12742 mRNA_4374 0.80 -1.3
45,452 - 12742 mRNA_4374 0.80 0.4
45,462 + 12742 mRNA_4374 0.80 3.0
45,471 - 12742 mRNA_4374 0.81 0.1
45,741 - 12742 mRNA_4374 0.90 -0.3
45,744 - 1.4
45,744 + 0.4
45,773 + -0.1
45,906 + 0.3
45,912 - 0.1
45,918 - 0.1
45,996 - 2.3
46,018 + 1.0
46,034 - -0.8
46,055 - 0.3
46,059 + 0.7
46,060 + -0.2
46,074 + 0.3
46,155 - -0.6
46,186 + 1.6
46,189 - 0.0
46,191 + 1.0
46,192 + -1.0
46,195 - -1.0
46,201 + -0.4
46,202 + 0.3
46,203 - 1.0
46,205 + 0.6
46,208 - -1.7
46,208 - 0.0
46,217 + -1.3
46,217 + 0.3
46,219 - 0.0
46,227 - 0.1
46,230 + -0.9
46,233 + 0.4
46,235 + -1.2
46,237 - -1.5
46,237 + 3.6
46,287 + 0.2
46,334 + 0.1
46,342 - -0.3
46,346 + -1.8
46,355 + 0.6
46,355 - 1.5
46,367 + 1.0
46,367 + 0.5
46,367 - 1.9
46,368 - -1.2
46,369 - -1.6
46,383 - 0.2
46,384 + 1.5
46,387 + -1.6
46,623 - 0.2
46,759 + 12743 mRNA_4375 0.13 2.3
46,940 - 12743 mRNA_4375 0.19 -0.2
46,947 - 12743 mRNA_4375 0.20 0.0
46,956 + 12743 mRNA_4375 0.20 0.3
46,976 + 12743 mRNA_4375 0.21 2.1