Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4365

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4365: 12733 - HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF13920, at 18950 to 21856 12733 mRNA_4366: 12734 - K11650 SMARCD SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D, at 22211 to 24480 12734

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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18,058 - 0.0
18,113 + 0.6
18,275 + 0.1
18,635 - 2.8
18,882 + 2.5
18,986 - -0.1
19,137 + 2.4
19,387 + 12733 mRNA_4365 0.15 0.4
19,390 + 12733 mRNA_4365 0.15 0.6
19,532 - 12733 mRNA_4365 0.20 1.0
19,703 - 12733 mRNA_4365 0.26 0.5
19,813 + 12733 mRNA_4365 0.30 1.7
20,459 - 12733 mRNA_4365 0.52 -1.5
20,904 + 12733 mRNA_4365 0.67 -1.2
21,199 - 12733 mRNA_4365 0.77 -0.0
21,200 + 12733 mRNA_4365 0.77 -0.0
21,352 + 12733 mRNA_4365 0.83 -0.2
21,352 - 12733 mRNA_4365 0.83 0.4
21,359 - 12733 mRNA_4365 0.83 0.5
21,478 + 12733 mRNA_4365 0.87 -0.9
21,496 - 12733 mRNA_4365 0.88 2.4
21,632 + 0.3
21,651 + -3.3
21,774 + 1.0
21,778 - 0.8
21,810 - -3.2
21,934 - -0.6
21,956 + 0.1
22,068 - -0.7
22,071 - -0.4
22,077 - 1.8
22,080 - 2.8
22,099 + -0.9
22,104 + -0.4
22,104 + 1.4
22,231 + 1.5
22,243 + -0.5