Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4362

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4362: 12730 - KOG0907 Thioredoxin, at 6490 to 7048 12730 mRNA_4363: 12731 - K19562 BIO3-BIO1 bifunctional dethiobiotin synthetase / adenosylmethionine---8-amino-7-oxononanoate aminotransferase, at 7688 to 10353 12731

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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5,604 - 0.5
5,607 - -0.3
5,690 + 1.5
5,700 - 0.5
5,742 - 2.7
5,755 - -0.3
5,755 - -0.0
5,884 + -0.1
5,896 + 0.6
5,900 + -1.2
6,017 - 1.6
6,033 + -0.4
6,042 - -0.7
6,051 + 0.4
6,053 - 0.3
6,209 - 0.9
6,226 - 2.0
6,282 + 0.7
6,285 + -0.9
6,320 + -0.1
6,322 + 1.4
6,348 + 1.1
6,389 + -0.5
6,424 + -0.2
6,656 + 12730 mRNA_4362 0.30 -1.7
6,678 + 12730 mRNA_4362 0.34 0.2
6,773 + 12730 mRNA_4362 0.51 -2.2
6,784 + 12730 mRNA_4362 0.53 0.8
6,822 + 12730 mRNA_4362 0.59 1.3
6,879 + 12730 mRNA_4362 0.70 -2.4
6,921 - 12730 mRNA_4362 0.77 0.5
6,936 - 12730 mRNA_4362 0.80 0.5
6,949 + 12730 mRNA_4362 0.82 0.2
6,976 - 12730 mRNA_4362 0.87 0.3
7,082 + 0.2
7,084 + -0.6
7,088 + -0.2
7,097 + -0.4
7,244 + 3.1
7,286 + 1.8
7,436 - 1.5
7,475 + 0.9
7,525 - -0.2
7,538 + 2.3