Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4333

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4332: 12700 - K02912 RP-L32e, RPL32 large subunit ribosomal protein L32e, at 1929363 to 1930179 12700 mRNA_4333: 12701 - Hypothetical Protein, at 1930244 to 1931329 12701 mRNA_4334: 12702 - K10534 NR nitrate reductase (NAD(P)H), at 1931652 to 1934999 12702

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,929,309 + -1.4
1,930,966 - 12701 mRNA_4333 0.66 -0.3
1,930,972 - 12701 mRNA_4333 0.67 0.5
1,930,976 + 12701 mRNA_4333 0.67 0.9
1,930,980 + 12701 mRNA_4333 0.68 -0.6
1,930,989 + 12701 mRNA_4333 0.69 1.0
1,931,115 - 12701 mRNA_4333 0.80 0.4
1,931,122 - 12701 mRNA_4333 0.81 -0.4
1,931,134 - 12701 mRNA_4333 0.82 0.9
1,931,269 + 0.3
1,931,418 - 0.4
1,931,421 - -0.1
1,931,425 + 2.5
1,931,439 - 1.7
1,931,443 + 1.0
1,931,563 - 0.1
1,931,586 + 0.8
1,931,587 + 0.5
1,931,704 - 0.2
1,931,714 + -0.7
1,931,741 + -0.1
1,931,863 + 1.1
1,932,028 - 12702 mRNA_4334 0.11 -0.5
1,932,032 - 12702 mRNA_4334 0.11 -0.7
1,932,180 + 12702 mRNA_4334 0.16 0.8
1,932,314 + 12702 mRNA_4334 0.20 0.1