Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4324

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1908331 to 1909628 12691 mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1909910 to 1911534 12692 mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1912299 to 1914440 12693

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,909,462 - 12691 mRNA_4323 0.87 -0.1
1,910,033 + -0.4
1,910,167 + 12692 mRNA_4324 0.16 -1.0
1,910,422 + 12692 mRNA_4324 0.32 -0.6
1,911,037 + 12692 mRNA_4324 0.69 2.1
1,912,138 + 2.2
1,912,261 - -1.6
1,912,311 - 0.8