Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4313

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4313: 12681 - Hypothetical Protein, at 1878884 to 1880623 12681 mRNA_4314: 12682 - Hypothetical Protein, at 1881006 to 1883368 12682

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,877,971 + 0.2
1,877,980 - -0.2
1,877,984 + -0.5
1,877,987 - -0.8
1,878,097 + -0.2
1,878,114 - -0.2
1,878,114 - 1.4
1,878,114 - 2.7
1,878,118 - 2.1
1,878,141 - 1.9
1,878,145 + 0.5
1,878,423 - 0.1
1,878,689 - -0.1
1,878,692 - -0.8
1,878,695 - 1.0
1,878,696 - -0.7
1,878,696 + -0.2
1,878,696 + 0.8
1,878,697 - 1.7
1,878,703 - -0.3
1,878,705 - -0.1
1,878,718 + -0.2
1,878,722 + 2.4
1,878,724 - 0.4
1,878,725 - 0.0
1,878,725 + -1.3
1,878,727 - 0.1
1,878,734 - -0.8
1,878,779 + 0.7
1,878,789 + -1.4
1,878,798 - 2.0
1,878,800 - -1.2
1,878,801 - -0.3
1,878,801 - 1.2
1,878,802 - -0.3
1,878,803 - -0.3
1,878,806 + -0.1
1,878,806 + 1.8
1,878,808 + 1.7
1,878,810 - 0.6
1,878,813 + 0.2
1,878,815 + 0.3
1,878,816 + -1.1
1,878,823 + 0.0
1,878,825 + -0.5
1,878,840 + 0.5
1,878,841 - -1.1
1,878,844 + 3.7
1,878,848 + 0.9
1,878,848 + 1.6
1,878,850 + -0.8
1,878,953 - -0.8
1,878,965 - 0.5
1,878,981 + -1.3
1,878,994 - 2.2
1,879,003 - 0.5
1,879,003 - 0.2
1,879,009 + -0.1
1,879,017 + -0.7
1,879,055 + 0.7
1,879,115 + 12681 mRNA_4313 0.13 -0.0
1,879,130 - 12681 mRNA_4313 0.14 0.3
1,879,168 - 12681 mRNA_4313 0.16 -0.5
1,879,198 + 12681 mRNA_4313 0.18 1.8
1,879,272 - 12681 mRNA_4313 0.22 -2.0
1,879,280 - 12681 mRNA_4313 0.23 -1.1
1,879,289 - 12681 mRNA_4313 0.23 0.9
1,879,305 - 12681 mRNA_4313 0.24 0.7
1,879,439 - 12681 mRNA_4313 0.32 0.6
1,879,445 + 12681 mRNA_4313 0.32 0.8
1,879,456 + 12681 mRNA_4313 0.33 2.4
1,879,459 + 12681 mRNA_4313 0.33 0.0
1,879,576 - 12681 mRNA_4313 0.40 0.3
1,880,040 - 12681 mRNA_4313 0.66 0.7
1,880,166 - 12681 mRNA_4313 0.74 0.7
1,880,179 + 12681 mRNA_4313 0.74 -0.3
1,880,365 - 12681 mRNA_4313 0.85 -0.8
1,880,574 - -0.1
1,880,630 - 0.3
1,880,767 + -0.0
1,880,914 - 0.5
1,880,926 + 0.4
1,881,244 + 12682 mRNA_4314 0.10 -0.4
1,881,396 + 12682 mRNA_4314 0.17 0.1