Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4311

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4310: 12678 - Hypothetical Protein, at 1869804 to 1870732 12678 mRNA_4311: 12679 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1871277 to 1872200 12679 mRNA_4312: 12680 - K14802 DRS2, ATP8A phospholipid-transporting ATPase, at 1872591 to 1877235 12680

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,870,354 + 12678 mRNA_4310 0.59 0.7
1,870,486 - 12678 mRNA_4310 0.73 -0.7
1,870,625 + 12678 mRNA_4310 0.88 -0.1
1,870,647 + 2.4
1,870,761 + 0.6
1,870,771 + 1.1
1,870,783 - -0.8
1,870,785 + -0.4
1,870,788 - 0.6
1,870,812 + 0.4
1,870,967 + -0.3
1,871,079 + 1.5
1,871,083 - -1.5
1,871,102 + -0.4
1,871,524 - 12679 mRNA_4311 0.27 -0.7
1,871,611 + 12679 mRNA_4311 0.36 3.0
1,871,676 + 12679 mRNA_4311 0.43 0.6
1,871,813 - 12679 mRNA_4311 0.58 1.0
1,871,853 - 12679 mRNA_4311 0.62 0.5
1,871,867 - 12679 mRNA_4311 0.64 2.5
1,871,966 - 12679 mRNA_4311 0.75 3.3
1,872,127 + 1.3
1,872,223 - 0.1
1,872,223 - 0.2
1,872,277 - 0.3
1,872,314 + 2.6
1,872,421 + 1.1
1,872,573 - 1.5
1,872,647 - -0.2
1,872,885 + -1.4
1,872,920 + 1.4
1,873,047 + -0.1
1,873,143 - 12680 mRNA_4312 0.12 -1.1