Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4290

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4289: 12657 - K15445 TRMT10A, TRM10, RG9MTD2 tRNA (guanine9-N1)-methyltransferase, at 1812694 to 1814089 12657 mRNA_4290: 12658 - Hypothetical Protein, at 1814315 to 1814636 12658 mRNA_4291: 12659 - Hypothetical Protein, at 1815371 to 1816823 12659

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,813,591 + 12657 mRNA_4289 0.64 -1.3
1,813,716 - 12657 mRNA_4289 0.73 0.3
1,813,734 - 12657 mRNA_4289 0.74 0.3
1,813,895 + 12657 mRNA_4289 0.86 -0.6
1,813,908 + 12657 mRNA_4289 0.87 1.2
1,814,200 - 1.1
1,814,266 - 1.6
1,814,347 - -1.4
1,814,457 + 12658 mRNA_4290 0.44 2.7
1,814,726 - 0.0
1,814,741 + -0.5
1,814,850 - 0.3
1,814,887 + 0.0
1,814,917 + -0.5
1,815,019 + 0.9
1,815,177 - 0.0
1,815,188 - 1.3
1,815,195 + 2.9
1,815,196 - 1.0
1,815,196 - 0.8
1,815,368 - 1.3
1,815,369 + 1.9