Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4149

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4148: 12516 - K00685 ATE1, ate1 arginine-tRNA-protein transferase, at 1468792 to 1470729 12516 mRNA_4149: 12517 - Hypothetical Protein, at 1471142 to 1472834 12517

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,470,257 - 12516 mRNA_4148 0.76 2.3
1,470,363 - 12516 mRNA_4148 0.81 1.2
1,470,398 - 12516 mRNA_4148 0.83 0.1
1,470,423 - 12516 mRNA_4148 0.84 -0.1
1,470,524 - 12516 mRNA_4148 0.89 1.5
1,470,681 + 1.1
1,470,778 - 1.8
1,470,784 + -0.6
1,470,939 - -0.3
1,470,985 - 0.3
1,471,111 - 1.9
1,471,729 - 12517 mRNA_4149 0.35 0.5
1,471,871 + 12517 mRNA_4149 0.43 0.0
1,472,116 + 12517 mRNA_4149 0.58 1.1
1,472,265 - 12517 mRNA_4149 0.66 0.0
1,472,276 + 12517 mRNA_4149 0.67 1.0
1,472,276 - 12517 mRNA_4149 0.67 0.7
1,472,315 + 12517 mRNA_4149 0.69 0.1
1,472,714 + 0.1
1,472,993 - -0.5
1,473,148 + 0.6
1,473,441 - 0.3