Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4110

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4109: 12477 - Hypothetical Protein, at 1374753 to 1375099 12477 mRNA_4110: 12478 - BLAST metal resistance protein ycf1 [Trichosporon asahii va..., at 1375596 to 1376142 12478 mRNA_4111: 12479 - K20296 ANG2, VPS51 vacuolar protein sorting-associated protein 51, at 1376562 to 1377671 12479

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
1,374,739 + -1.1
1,374,890 + 12477 mRNA_4109 0.39 0.7
1,375,003 + 12477 mRNA_4109 0.72 -1.5
1,375,033 + 12477 mRNA_4109 0.81 0.4
1,375,504 - -1.9
1,376,002 - 12478 mRNA_4110 0.74 -1.3
1,376,145 - 1.2
1,376,335 - 1.8
1,376,468 + -0.1
1,376,469 + -0.1
1,376,472 + -1.1
1,376,477 + 1.1
1,376,485 - 0.2
1,376,490 - 0.2
1,376,493 - 1.3
1,376,499 - 0.4
1,376,499 + 0.0
1,376,509 - -0.1
1,376,795 - 12479 mRNA_4111 0.21 0.8
1,376,810 - 12479 mRNA_4111 0.22 0.5
1,377,057 - 12479 mRNA_4111 0.45 -0.9