Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4080

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4079: 12447 - KOG2518 5'-3' exonuclease, at 1305952 to 1309026 12447 mRNA_4080: 12448 - Hypothetical Protein, at 1309088 to 1309498 12448

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,308,095 - 12447 mRNA_4079 0.70 -0.2
1,308,112 + 12447 mRNA_4079 0.70 0.3
1,308,115 + 12447 mRNA_4079 0.70 -0.7
1,308,262 - 12447 mRNA_4079 0.75 -0.7
1,308,374 + 12447 mRNA_4079 0.79 -0.2
1,308,416 - 12447 mRNA_4079 0.80 -0.6
1,308,462 - 12447 mRNA_4079 0.82 0.3
1,308,531 - 12447 mRNA_4079 0.84 -0.5
1,308,567 - 12447 mRNA_4079 0.85 -0.0
1,308,696 - 12447 mRNA_4079 0.89 -0.2
1,308,983 - -0.9
1,309,279 + 12448 mRNA_4080 0.46 2.6
1,309,422 - 12448 mRNA_4080 0.81 -0.5
1,309,852 - -1.0
1,309,858 - 0.7
1,309,875 + 1.2
1,310,161 + -0.0
1,310,252 + -2.2
1,310,253 - -0.9
1,310,275 - -0.8
1,310,313 - -1.7
1,310,323 - -0.6
1,310,331 - -0.1
1,310,332 + -2.5
1,310,336 + -0.1
1,310,338 - 1.3
1,310,339 + 0.2
1,310,349 + -0.1
1,310,495 + 0.7