Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3975

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3974: 12342 - K02350 POLZ1, rev3 DNA polymerase zeta, at 1033703 to 1040837 12342 mRNA_3975: 12343 - KOG1938 Protein with predicted involvement in meiosis (GSG1), at 1041563 to 1046675 12343 mRNA_3976: 12344 - K20473 NBAS neuroblastoma-amplified sequence, at 1047076 to 1050963 12344

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,040,567 + -0.4
1,040,873 - 0.0
1,041,349 - 0.3
1,041,442 + 0.7
1,041,525 - 1.2
1,042,124 - 12343 mRNA_3975 0.11 0.6
1,042,942 - 12343 mRNA_3975 0.27 0.9
1,046,596 - -0.0
1,046,854 - 1.7
1,046,855 + 0.2
1,046,863 - 0.2
1,046,864 + 0.4
1,046,894 - 1.0
1,047,001 - -0.0