Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3955

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3954: 12322 - KOG1426 FOG RCC1 domain, at 985055 to 988023 12322 mRNA_3955: 12323 - K02355 fusA, GFM, EFG elongation factor G, at 988308 to 991427 12323 mRNA_3956: 12324 - KOG1843 Uncharacterized conserved protein, at 991807 to 993961 12324

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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987,657 + 12322 mRNA_3954 0.88 -1.0
987,847 + 2.1
988,046 + -1.0
988,161 - 1.0
988,164 + -1.1
988,167 + -0.4
988,170 - 0.7
988,174 + -0.6
988,188 + 0.7
988,199 + 0.9
989,157 - 12323 mRNA_3955 0.27 2.7
991,503 - -0.9
991,978 - 1.4
992,291 + 12324 mRNA_3956 0.22 -1.5
992,293 - 12324 mRNA_3956 0.23 0.3
992,427 + 12324 mRNA_3956 0.29 -0.5