Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3931

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3930: 12298 - Hypothetical Protein, at 929708 to 931043 12298 mRNA_3931: 12299 - BLAST protein [Lichtheimia corymbifera JMRC-FSU-9682], at 931506 to 935642 12299 mRNA_3932: 12300 - K18532 AK6, FAP7 adenylate kinase, at 935952 to 936713 12300

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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930,514 + 12298 mRNA_3930 0.60 -2.1
930,527 + 12298 mRNA_3930 0.61 1.0
930,982 + 0.1
931,086 + 1.2
931,088 + 0.6
931,232 + -0.2
931,234 + 0.6
931,241 + -0.6
931,270 + 0.5
931,379 - 0.6
931,403 - -1.5
931,407 + 1.2
931,412 + 1.3
931,427 - 1.1
931,429 + 0.2
931,433 - -0.1
931,450 + -0.4
931,699 + 0.1
931,866 + 0.8
931,890 + 0.2
931,896 - -1.7
932,001 + 12299 mRNA_3931 0.12 -0.9
932,602 - 12299 mRNA_3931 0.26 2.9
932,920 - 12299 mRNA_3931 0.34 1.4
933,501 + 12299 mRNA_3931 0.48 2.4
933,630 - 12299 mRNA_3931 0.51 1.1
933,999 + 12299 mRNA_3931 0.60 2.2
934,025 - 12299 mRNA_3931 0.61 0.2
934,402 - 12299 mRNA_3931 0.70 1.9
934,554 - 12299 mRNA_3931 0.74 1.0
934,566 - 12299 mRNA_3931 0.74 0.5
934,595 + 12299 mRNA_3931 0.75 -0.8
935,160 + 12299 mRNA_3931 0.88 1.2
935,176 + 12299 mRNA_3931 0.89 -0.4
935,774 + -0.3
935,945 - -0.6