Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3906

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3906: 12274 - K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 865746 to 868815 12274 mRNA_3907: 12275 - Hypothetical Protein, at 869074 to 869751 12275

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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864,761 - 0.1
864,870 - 3.0
864,921 - -0.6
865,062 - 0.1
865,069 + 1.2
865,221 - -0.8
865,230 + 1.0
865,362 + 2.4
865,363 - 3.3
865,382 - 0.2
865,392 + 3.5
865,503 - 0.3
865,505 + 1.2
865,517 + 0.0
865,525 + 1.5
865,526 - -1.2
865,695 - 1.5
866,320 - 12274 mRNA_3906 0.19 -0.3
866,400 - 12274 mRNA_3906 0.21 -0.1
866,668 + 12274 mRNA_3906 0.30 2.5
867,124 + 12274 mRNA_3906 0.45 3.0
867,664 + 12274 mRNA_3906 0.62 -0.4
867,832 + 12274 mRNA_3906 0.68 0.1
868,276 + 12274 mRNA_3906 0.82 -0.1
868,299 - 12274 mRNA_3906 0.83 -0.9
868,418 - 12274 mRNA_3906 0.87 0.3
868,555 + -0.3
868,690 - -0.2
868,702 + 0.8
868,878 + 0.4
869,005 - 0.2
869,017 + 1.0
869,164 - 12275 mRNA_3907 0.13 0.1
869,182 + 12275 mRNA_3907 0.16 -0.9
869,184 - 12275 mRNA_3907 0.16 1.2
869,782 + 0.2