Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3901

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3900: 12268 - SUPERFAMILY--SSF55729, at 850598 to 851508 12268 mRNA_3901: 12269 - K00863 DAK, TKFC triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing), at 852096 to 854470 12269 mRNA_3902: 12270 - K12471 EPN epsin, at 855134 to 857273 12270

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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851,382 + 12268 mRNA_3900 0.86 0.9
851,620 - 0.0
851,865 + 0.1
851,873 - 1.6
851,927 - 0.6
852,069 + 1.1
852,171 - -0.2
852,639 + 12269 mRNA_3901 0.23 -1.1
853,339 - 12269 mRNA_3901 0.52 0.2
853,389 + 12269 mRNA_3901 0.54 -0.0
853,635 - 12269 mRNA_3901 0.65 0.2
853,661 - 12269 mRNA_3901 0.66 -0.0
853,779 - 12269 mRNA_3901 0.71 0.7
853,906 + 12269 mRNA_3901 0.76 1.0
854,074 - 12269 mRNA_3901 0.83 0.2
854,091 - 12269 mRNA_3901 0.84 0.3
854,324 + 0.5
854,389 + 0.3
854,496 - 0.9
854,501 + 0.6
854,512 - 0.8
854,516 - 0.2
854,519 + 0.5
854,526 - 1.9
854,527 + -0.4
854,531 + -0.1
854,663 + 2.3
854,663 - -0.3
854,665 - -0.4
854,665 - -0.5
854,667 - 2.3
854,668 + 1.3
854,668 + -0.0
854,670 + -0.5
854,675 - -1.4
854,675 + -0.9
854,675 - -0.0
854,676 + 1.9
854,676 + 1.2
854,677 + 0.3
854,679 + 1.3
854,692 - 0.7
854,695 - 1.1
854,743 - 0.7
854,762 + 0.5
854,765 - 0.2
854,770 - 1.5
854,775 + 0.2
854,786 + -2.5
854,891 - 0.0
854,908 + 0.8
854,916 + 0.1
854,925 - -1.0
854,927 - 0.1
855,054 - 0.8
855,071 + 2.9