Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3895

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3894: 12262 - SUPERFAMILY--SSF54695, at 842449 to 843578 12262 mRNA_3895: 12263 - Hypothetical Protein, at 844130 to 844681 12263 mRNA_3896: 12264 - BLAST F-box domain containing protein [Metarhizium maju..., at 844807 to 845932 12264

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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843,200 - 12262 mRNA_3894 0.66 -0.2
843,417 - 12262 mRNA_3894 0.86 1.2
843,474 + 0.5
843,479 - 1.1
843,481 + -1.8
843,481 + -0.5
843,606 - 1.8
843,621 - -1.5
843,623 - 0.2
843,627 + 1.8
843,647 - -0.3
843,723 - 0.7
843,747 - -1.0
843,757 - 0.7
843,908 - 0.4
843,941 + -0.1
844,047 - -0.6
844,055 - 0.4
844,056 + -0.8
844,071 + 0.4
844,143 + 0.1
844,198 + 12263 mRNA_3895 0.12 -0.8
844,332 - 12263 mRNA_3895 0.37 -1.4
844,340 + 12263 mRNA_3895 0.38 0.0
844,365 - 12263 mRNA_3895 0.43 -0.3
844,370 - 12263 mRNA_3895 0.43 -1.5
844,371 + 12263 mRNA_3895 0.44 -2.7
844,385 + 12263 mRNA_3895 0.46 -0.4
844,392 + 12263 mRNA_3895 0.47 1.0
844,410 - 12263 mRNA_3895 0.51 0.6
844,423 - 12263 mRNA_3895 0.53 -0.5
844,543 + 12263 mRNA_3895 0.75 -1.3
844,665 - 0.4
844,671 - 0.3
844,678 + -1.1
844,699 + -0.9
844,708 + 0.8
844,709 + 0.4
844,711 - 0.1
844,713 + -0.1
845,136 - 12264 mRNA_3896 0.29 -0.4
845,300 - 12264 mRNA_3896 0.44 0.9
845,431 + 12264 mRNA_3896 0.55 -0.5