Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3884

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817567 to 820111 12251 mRNA_3884: 12252 - Hypothetical Protein, at 820246 to 821511 12252

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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819,307 + 12251 mRNA_3883 0.68 -1.0
819,623 - 12251 mRNA_3883 0.81 0.5
820,020 + -0.4
820,055 - -1.2
820,162 + 1.0
820,203 + -0.5
820,328 - 0.1
820,351 + -0.6
820,560 + 12252 mRNA_3884 0.25 -1.2
820,587 - 12252 mRNA_3884 0.27 0.2
820,658 - 12252 mRNA_3884 0.33 0.6
820,914 + 12252 mRNA_3884 0.53 -0.3
820,927 - 12252 mRNA_3884 0.54 -0.2
821,072 + 12252 mRNA_3884 0.65 0.4
821,240 - 12252 mRNA_3884 0.79 1.3
821,297 - 12252 mRNA_3884 0.83 2.2
821,400 + 0.6
821,497 + 1.8
821,504 + 0.2
821,507 + 0.4
821,513 + 1.4
821,530 + -0.6
821,552 + -0.4
821,563 - 1.0
821,604 - 0.5
821,619 - -0.7
821,634 - 0.0
821,634 - 0.2
821,642 + 1.2
821,674 + 0.1
821,692 + 2.6
821,706 + -0.5
821,716 - 0.7
821,766 + 2.3
821,782 + -1.2
821,791 - 0.7
821,794 - 1.5
821,803 - -0.0
821,809 + -0.3
821,811 - 1.6
821,811 - -1.0
821,814 - -0.6
821,822 - -0.8
821,835 - 1.4
821,836 + 0.7
821,841 - 0.3
821,845 + -0.0
821,849 - 2.4
821,857 - 0.3
821,866 - 0.1
821,875 - -0.2
821,876 + 1.0
821,880 - 0.0
821,881 + -0.5
821,884 + 0.2
821,896 + 1.0
821,898 - 1.1
821,899 - -0.1
821,900 - 1.2
821,902 - -2.1
821,903 + -0.2
821,907 - 1.8
821,910 - 2.5
821,910 + 0.2
821,916 - 0.1
821,918 + -0.3
821,924 - 0.8
821,925 - -0.3
821,926 + 0.4
821,931 - 1.8
821,931 + -1.5
821,935 - -0.2
821,939 - -0.6
821,940 + 1.5
821,951 - -2.6
821,954 + 2.1
821,955 - 0.8
821,962 + 0.9
821,964 - 0.7
821,967 - 0.1
821,967 + 1.6
821,970 + 0.1
821,976 + -1.9
821,988 - -0.5
821,989 + 0.0
821,999 + -0.0
821,999 - 1.8
822,026 + -0.9
822,028 - 1.9
822,042 + 0.6
822,048 + 0.3
822,061 + -0.1
822,063 - 3.0
822,068 + 0.5
822,069 + 0.4
822,071 - 0.4
822,072 - 1.4
822,079 - 0.8
822,082 - 0.7
822,082 + 0.8
822,083 - 1.8
822,084 - 0.4
822,086 - -0.6
822,087 + -0.2
822,094 + -0.4
822,097 - 0.9
822,105 + -1.1
822,105 + 0.0
822,115 - -0.1
822,117 + 1.3
822,119 - -0.4
822,127 + 1.4
822,155 + 0.3
822,159 + -1.2
822,166 - -0.4
822,187 - -1.7
822,192 + 3.4
822,197 + -2.0
822,197 - -1.2
822,213 - -0.5
822,220 + -0.0
822,224 - 0.1
822,229 + 1.5
822,246 - -0.9
822,247 - -0.0
822,257 - 1.8
822,257 - 0.4
822,260 + 1.2
822,262 - -1.4
822,265 - 0.3
822,266 + -1.1
822,290 + 0.3
822,299 - -1.0
822,300 - 1.7
822,305 - 0.9
822,311 - 0.6
822,313 + 1.6
822,314 + -0.0
822,320 + -1.3
822,325 - 0.0
822,325 - 2.5
822,330 + -0.0
822,370 - 1.6
822,374 - 1.7
822,376 + -0.4
822,384 + 0.7
822,392 - 1.5
822,400 + 0.7
822,407 - 0.4
822,413 + 1.6
822,445 + 0.2
822,457 - 0.1
822,462 + 0.1
822,470 - -1.7
822,473 + -0.2
822,484 + 1.3
822,485 - 0.8
822,485 - -0.6
822,486 + 0.3
822,495 + 0.0
822,495 - 0.7