Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3878

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3878: 12246 - K07975 K07975 Rho family, other, at 809804 to 811045 12246 mRNA_3879: 12247 - Interpro Selenoprotein SelK_SelG, at 811174 to 811650 12247

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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809,186 - 1.1
809,194 + 0.2
809,208 - 0.5
809,215 + 0.6
809,232 + 1.6
809,355 - -0.2
809,355 - -0.0
809,387 - -0.9
809,404 + -0.6
809,511 + 1.5
809,517 - 2.2
809,519 - 1.2
809,527 - 0.3
809,529 - 0.8
809,531 - 1.2
809,535 + -0.4
809,546 - 1.2
809,548 + 0.3
809,548 + 0.0
809,556 + -0.2
809,585 - 1.1
809,586 + -1.4
809,596 - 1.3
809,726 + -0.1
809,729 + 0.9
809,856 + 0.6
809,867 + 0.9
810,010 - 12246 mRNA_3878 0.17 0.5
810,235 - 12246 mRNA_3878 0.35 1.2
810,299 - 12246 mRNA_3878 0.40 1.3
810,422 + 12246 mRNA_3878 0.50 0.3
810,493 - 12246 mRNA_3878 0.55 -2.2
810,735 + 12246 mRNA_3878 0.75 0.4
810,811 - 12246 mRNA_3878 0.81 0.9
811,149 - -0.1
811,152 - 0.7
811,153 + 0.0
811,159 - 1.5
811,171 - -0.3
811,171 - 0.4
811,171 - -2.1
811,176 + -0.2
811,179 - 3.7
811,180 - 0.4
811,180 + -0.6
811,181 + 0.8
811,181 + 1.0
811,185 + 1.8
811,271 + 12247 mRNA_3879 0.20 0.5
811,297 - 12247 mRNA_3879 0.26 2.7
811,303 - 12247 mRNA_3879 0.27 -2.2
811,593 - 12247 mRNA_3879 0.88 0.9
811,603 - -0.2
811,625 + 0.1