Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3875

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801011 to 802122 12242 mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802441 to 804314 12243 mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804740 to 806816 12244

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
801,831 + 12242 mRNA_3874 0.74 2.2
801,837 - 12242 mRNA_3874 0.74 -0.5
801,844 + 12242 mRNA_3874 0.75 -0.7
801,860 + 12242 mRNA_3874 0.76 0.2
802,022 + 1.3
802,100 + -0.6
802,102 - 1.8
802,166 + -0.0
802,173 + 0.5
802,867 - 12243 mRNA_3875 0.23 -1.1
802,978 - 12243 mRNA_3875 0.29 -0.8
802,988 - 12243 mRNA_3875 0.29 0.6
803,037 - 12243 mRNA_3875 0.32 -0.5
803,044 + 12243 mRNA_3875 0.32 -1.8
803,047 - 12243 mRNA_3875 0.32 0.7
803,160 + 12243 mRNA_3875 0.38 0.2
803,325 - 12243 mRNA_3875 0.47 2.5
803,424 + 12243 mRNA_3875 0.52 0.4
803,435 - 12243 mRNA_3875 0.53 0.6
804,037 + 12243 mRNA_3875 0.85 0.7
804,051 - 12243 mRNA_3875 0.86 -1.0
804,177 + -0.1
804,190 + 2.7
804,323 - -0.2
804,326 - 0.4
804,334 + 0.8
804,335 + -0.7
804,344 + 0.8
804,489 + 2.5
804,750 + -0.1
804,759 - -0.3
805,179 - 12244 mRNA_3876 0.21 -0.5