Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3855

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3854: 12222 - Hypothetical Protein, at 749490 to 750342 12222 mRNA_3855: 12223 - SUPERFAMILY--SSF52047, at 750615 to 752769 12223 mRNA_3856: 12224 - Hypothetical Protein, at 752921 to 753919 12224

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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749,661 - 12222 mRNA_3854 0.20 1.9
749,852 - 12222 mRNA_3854 0.42 -1.7
749,999 - 12222 mRNA_3854 0.60 -0.3
750,004 + 12222 mRNA_3854 0.60 -0.3
750,021 - 12222 mRNA_3854 0.62 1.1
750,046 + 12222 mRNA_3854 0.65 -0.7
750,391 + -1.1
751,165 + 12223 mRNA_3855 0.26 -0.3
751,196 + 12223 mRNA_3855 0.27 -0.2
751,907 + 12223 mRNA_3855 0.60 -0.3
752,040 - 12223 mRNA_3855 0.66 0.5
752,350 + 12223 mRNA_3855 0.81 0.3
752,492 + 12223 mRNA_3855 0.87 0.5
752,688 - 2.5
752,784 - 1.2
752,794 + 2.9
752,799 - -1.0
752,801 + 0.1
752,935 + -2.4
752,938 - 1.3
752,944 + -0.3
753,282 + 12224 mRNA_3856 0.36 0.5
753,655 - 12224 mRNA_3856 0.73 1.3