Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3833

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3832: 12200 - Hypothetical Protein, at 690949 to 691867 12200 mRNA_3833: 12201 - K15196 BRF1, GTF3B transcription factor IIIB 90 kDa subunit, at 692168 to 694484 12201 mRNA_3834: 12202 - Hypothetical Protein, at 695407 to 697402 12202

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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691,193 - 12200 mRNA_3832 0.27 4.1
691,202 + 12200 mRNA_3832 0.28 2.8
691,813 + 1.2
691,917 - 0.7
691,919 - 0.4
691,927 + 0.4
691,928 - 0.5
691,936 + 2.7
691,949 - 2.0
691,973 - 1.2
691,996 - 0.4
692,113 + 2.0
692,205 - -0.7
692,399 + 0.6
692,401 + 12201 mRNA_3833 0.10 -1.3
692,403 - 12201 mRNA_3833 0.10 -0.3
694,855 - -0.7
694,876 + 0.2
694,992 - -0.6
695,007 - 1.9
695,036 + -0.6
695,141 - -0.6
695,154 + 1.7
695,213 + 0.2