Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3815

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3814: 12182 - PRINTS-Proline rich extensin signature-PR01217, at 642140 to 643933 12182 mRNA_3815: 12183 - K06631 PLK1 polo-like kinase 1, at 644354 to 647784 12183 mRNA_3816: 12184 - KOG3613 Dopey and related predicted leucine zipper transcription factors, at 648075 to 655221 12184

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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643,397 - 12182 mRNA_3814 0.70 1.1
643,554 - 12182 mRNA_3814 0.79 -2.1
643,696 - 12182 mRNA_3814 0.87 -1.3
643,837 - 0.7
643,867 + -1.5
644,275 - 0.9
644,305 - 1.0
644,307 - -1.0
644,455 - -2.4
644,460 + -3.2
647,270 + 12183 mRNA_3815 0.85 1.9
648,244 + -1.8
648,326 - -0.7
648,362 - 1.7
648,420 + 0.1
648,523 - 1.5
648,535 - 2.8
648,739 - 1.2