Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3788

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3787: 12155 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 581185 to 583154 12155 mRNA_3788: 12156 - Hypothetical Protein, at 583211 to 584056 12156 mRNA_3789: 12157 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 584347 to 585517 12157

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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582,482 + 12155 mRNA_3787 0.66 -0.2
582,666 - 12155 mRNA_3787 0.75 -0.6
583,275 + 2.9
583,284 + -0.6
583,345 + 12156 mRNA_3788 0.16 1.6
583,371 - 12156 mRNA_3788 0.19 -0.5
583,409 + 12156 mRNA_3788 0.23 1.9
583,409 - 12156 mRNA_3788 0.23 2.4
583,415 - 12156 mRNA_3788 0.24 1.2
583,430 + 12156 mRNA_3788 0.26 0.9
583,713 - 12156 mRNA_3788 0.59 0.8
584,317 - 2.0
584,921 + 12157 mRNA_3789 0.49 0.2