Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3763

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3762: 12130 - Hypothetical Protein, at 525460 to 525822 12130 mRNA_3763: 12131 - Hypothetical Protein, at 526166 to 531244 12131 mRNA_3764: 12132 - K11808 ADE2 phosphoribosylaminoimidazole carboxylase, at 531400 to 533650 12132

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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525,171 - 1.6
525,252 - 0.3
525,269 + -1.4
525,377 + 0.1
525,566 + 12130 mRNA_3762 0.29 0.1
525,844 + 0.4
525,949 - 0.5
526,106 - -1.7
526,131 + 1.9
526,253 - -2.0
526,280 - 0.6
526,284 + 0.6
526,285 + 1.4
526,389 - -1.1
526,394 - -1.9
526,947 - 12131 mRNA_3763 0.15 -0.2
527,161 - 12131 mRNA_3763 0.20 -0.2
527,161 + 12131 mRNA_3763 0.20 0.3
527,982 + 12131 mRNA_3763 0.36 0.6
528,022 + 12131 mRNA_3763 0.37 2.0
528,091 - 12131 mRNA_3763 0.38 0.0
528,109 - 12131 mRNA_3763 0.38 -0.9
528,117 + 12131 mRNA_3763 0.38 -0.3
528,133 + 12131 mRNA_3763 0.39 0.6
528,134 - 12131 mRNA_3763 0.39 2.1
528,304 + 12131 mRNA_3763 0.42 3.3
528,398 - 12131 mRNA_3763 0.44 0.8
528,413 + 12131 mRNA_3763 0.44 -1.9
528,606 - 12131 mRNA_3763 0.48 1.3
529,000 - 12131 mRNA_3763 0.56 0.7
530,160 - 12131 mRNA_3763 0.79 0.5
530,222 - 12131 mRNA_3763 0.80 -1.3
530,452 - 12131 mRNA_3763 0.84 -0.1
530,559 - 12131 mRNA_3763 0.86 1.8
530,902 + -0.2