Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3746

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3745: 12113 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 486209 to 486880 12113 mRNA_3746: 12114 - Hypothetical Protein, at 487127 to 488004 12114 mRNA_3747: 12115 - Hypothetical Protein, at 488754 to 489655 12115

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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486,346 - 12113 mRNA_3745 0.20 0.4
486,937 - 0.0
486,965 + -0.7
487,072 - 0.2
487,090 - -0.2
487,231 - 12114 mRNA_3746 0.12 1.1
487,672 + 12114 mRNA_3746 0.62 0.5
487,797 + 12114 mRNA_3746 0.76 -0.2
487,955 - -0.4
487,978 + -0.0
488,005 - -2.5
488,106 + -0.4
488,157 - 1.0
488,252 + 1.4
488,261 - 1.3
488,388 - 0.3
488,712 + 2.5
488,836 + -0.2
488,846 + 12115 mRNA_3747 0.10 -1.7
488,863 + 12115 mRNA_3747 0.12 0.8
488,866 - 12115 mRNA_3747 0.12 0.2
488,880 - 12115 mRNA_3747 0.14 1.5