Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3736

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3735: 12103 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 461901 to 463089 12103 mRNA_3736: 12104 - K00573 E2.1.1.77, pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 463337 to 464527 12104 mRNA_3737: 12105 - BLAST TPR-2 domain protein [Rhizoctonia solani AG-3 Rhs1AP], at 464797 to 466425 12105

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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462,566 + 12103 mRNA_3735 0.56 0.9
462,884 + 12103 mRNA_3735 0.83 -0.5
462,885 - 12103 mRNA_3735 0.83 -0.4
463,740 + 12104 mRNA_3736 0.34 -0.5
463,754 + 12104 mRNA_3736 0.35 -0.7
463,990 - 12104 mRNA_3736 0.55 3.3
464,462 + 1.8
464,575 + -1.4
464,577 - -1.7
464,587 + 0.0
464,594 + -0.0
464,602 + 2.2
464,608 + -1.1
464,731 - 0.2
465,084 + 12105 mRNA_3737 0.18 0.1