Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3728

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3727: 12095 - SMART-Leucine rich repeat, ribonuclease inhibitor type-SM00368,SUPERFAMILY--SSF52047, at 439950 to 441597 12095 mRNA_3728: 12096 - K11142 LAP3 cytosol aminopeptidase, at 441671 to 443858 12096 mRNA_3729: 12097 - K15280 SLC35C2 solute carrier family 35, member C2, at 444211 to 445530 12097

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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441,534 + -1.3
441,537 - 2.1
442,147 + 12096 mRNA_3728 0.22 1.0
443,149 - 12096 mRNA_3728 0.68 0.2
443,150 - 12096 mRNA_3728 0.68 0.8
443,258 - 12096 mRNA_3728 0.73 -0.4
443,310 - 12096 mRNA_3728 0.75 -2.0
443,441 + 12096 mRNA_3728 0.81 1.2
443,572 - 12096 mRNA_3728 0.87 -0.6
443,750 - -0.0
443,791 - 0.1
443,836 - 3.5
443,837 - 1.0
443,853 + 1.3
443,880 - 1.2
443,885 + 0.5
443,898 - 1.0
443,903 - -2.0
443,903 - 3.1
443,905 + 1.9
443,911 + -1.0
443,919 + -0.1
443,920 + 0.1
443,932 - 0.3
443,933 - 1.1
443,961 + 0.7
443,962 - -1.1
443,966 - 1.0
443,973 + 1.8
444,026 - 0.2
444,032 - 0.6
444,053 - 0.9
444,055 + 1.1
444,070 + -2.2
444,081 - 0.9
444,149 + -1.4
444,158 + -0.5
444,177 + 0.3
444,186 + 1.2
444,200 + 2.3
444,218 + -1.2
444,331 + 1.4
444,620 - 12097 mRNA_3729 0.31 0.6
444,628 + 12097 mRNA_3729 0.32 -0.5