Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3709

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3708: 12076 - Hypothetical Protein, at 405406 to 406282 12076 mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406586 to 407790 12077 mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408038 to 408694 12078 mRNA_3711: 12079 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408733 to 409937 12079

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
405,721 + 12076 mRNA_3708 0.36 -0.7
405,768 + 12076 mRNA_3708 0.41 1.3
405,898 + 12076 mRNA_3708 0.56 0.2
405,907 - 12076 mRNA_3708 0.57 -0.7
406,186 - 12076 mRNA_3708 0.89 0.3
406,199 + -1.4
406,214 + -1.7
406,235 - 0.2
406,257 + -0.3
406,344 + -3.9
406,345 + 0.0
406,349 + 0.5
406,355 - 0.3
406,357 - -0.2
406,359 - -1.6
406,361 - -0.3
406,364 - 1.1
406,371 + -1.2
406,383 - 0.2
406,383 - 1.3
406,386 + 0.1
406,389 + 0.4
406,393 - 1.0
406,400 - 2.8
406,401 + 0.3
406,419 + 3.0
406,433 - 1.1
406,433 + -0.4
406,452 - -0.5
406,453 + 0.1
406,458 - 0.7
406,465 - 0.3
406,471 + 1.5
406,487 - -1.0
406,490 + 0.3
406,490 - 1.2
406,494 + 1.3
406,494 + -2.6
406,494 + 0.8
406,495 + 0.8
406,498 + -0.2
406,500 + 2.2
406,503 - 1.5
406,507 - 1.0
406,508 - 1.0
406,509 + -0.1
406,509 + 0.8
406,520 + -0.3
406,520 - 1.1
406,521 - -1.8
406,647 - -1.2
406,688 + -0.3
406,796 + 12077 mRNA_3709 0.17 0.7
406,803 + 12077 mRNA_3709 0.18 2.1
406,921 + 12077 mRNA_3709 0.28 -0.4
406,951 + 12077 mRNA_3709 0.30 0.4
407,087 - 12077 mRNA_3709 0.42 1.1
407,251 + 12077 mRNA_3709 0.55 0.8
407,486 - 12077 mRNA_3709 0.75 -0.3
407,927 - -0.8
407,937 + 1.4
408,220 + 12078 mRNA_3710 0.28 0.2